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Universal Functional Nutrigenomics Code

NutrigenDB

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Fanzor: First CRISPR-Like System Found in Eukaryotes

Another potentially game-changing discovery has come out of the lab of Feng Zhang, PhD. This time, they uncovered the first programmable RNA-guided system in eukaryotes. Just a few months ago, the Zhang lab adapted a contractile injection system, found naturally in bacteria, that deliver protein payloads to target human cells.

In this recent work, Zhang’s team describes how the system—based on the Fanzor protein—uses RNA as a guide to target DNA precisely, and that Fanzor can be reprogrammed to edit the genome of human cells. Additionally, the compact Fanzor systems have the potential to be more easily delivered to cells and tissues as therapeutics than CRISPR/Cas systems, and further refinements to improve their targeting efficiency could make them a valuable new technology for human genome editing.

Eukarite Crispr9

(Nrf2) (HO-1) is a primary regulator of essential cytoprotective responses in the brain.

It activates the expression of various neuroprotective genes that code for anti-oxidant, anti-inflammatory, and detoxifying proteins. 

 

The relationship between Keap1 and Nrf2 is disrupted during oxidant exposure, resulting in the transfer of Nrf2 to the nucleus, where they bind to the anti-oxidant response element (ARE) and stimulating anti-oxidant enzyme hemeoxygenase-1(HO-1) expression . It has been reported that HO-1 plays a significant role in the initial step of homeostatic adaptive responses, which have evolved to reduce tissue damage [7]. Nrf2 dysregulation causes increased immune cell infiltration and glial cell activation in the spinal cord. Johnson and co-workers discovered increased inflammatory cytokine and chemokine levels in Nrf2 knockout mice, suggesting that Nrf2 deficiency mice experience MS-like conditions similar to the experimental autoimmune encephalomyelitis (EAE) mice model . Previous studies indicated that Nrf2 modulation influences adaptive and innate immune responses in the MS EAE model [9]. HO-1 deficiency affects the pathogenesis of autoimmune-mediated neuroinflammation and demyelination 

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NRFT2

Activated

Diseases Caused by Down regulated Mechanisms

Downregulated

It activates the expression of various neuroprotective genes that code for anti-oxidant, anti-inflammatory, and detoxifying proteins. 

Downregulated

Diseases Caused by Down regulated Mechanisms

Downregulated

Downregulation of Nrf2/HO-1 anti-oxidant signaling is primarily responsible for developing multiple sclerosis (MS) and other neurodegenerative diseases. 

Diseases Caused by Down regulated Mechanisms

Diseases Caused by Down regulated Mechanisms

Diseases Caused by Down regulated Mechanisms

Downregulation of the Nrf2/HO-1 anti-oxidant signaling pathway significantly increased oxidative stress, neuroinflammation, immune dysregulation, oligodendrocyte loss, and demyelination associated with MS like complications.

Weak BBB Diseases

BBB Immune cell infiltration glial cell activation, increased inflammatory cytokines

Diseases Caused by Down regulated Mechanisms

HO-1 plays a significant role in the initial step of homeostatic adaptive responses, which have evolved to reduce tissue damage 

BBB Immune cell infiltration glial cell activation, increased inflammatory cytokines

BBB Immune cell infiltration glial cell activation, increased inflammatory cytokines

BBB Immune cell infiltration glial cell activation, increased inflammatory cytokines

Nrf2 dysregulation causes increased immune cell infiltration and glial cell activation in the spinal cord. Johnson and co-workers discovered increased inflammatory cytokine and chemokine levels in Nrf2 knockout mice, suggesting that Nrf2 deficiency mice experience MS-like conditions similar to the experimental autoimmune encephalomyelitis (EAE) mice model

Neuroinflammation & Demyelination

BBB Immune cell infiltration glial cell activation, increased inflammatory cytokines

BBB Immune cell infiltration glial cell activation, increased inflammatory cytokines

Previous studies indicated that Nrf2 modulation influences adaptive and innate immune responses in the MS EAE model . HO-1 deficiency affects the pathogenesis of autoimmune-mediated neuroinflammation and demyelination 

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downregulation of the Nrf2/HO-1 signaling, which reduces anti-oxidant enzyme levels [11], causing neuroinflammation [12], mitochondrial dysfunction [13], immune dysregulation [14], oligodendrocyte loss [15], apoptosis [16], and demyelination [17]. MS is a central nervous system (CNS) demyelinating neurodegenerative disease characterized by the production of focal inflammatory lesions in the brain, optic nerve, and spinal cord [18]. MS predominantly affects young adults [19], with females having a higher prevalence risk than males aged 20–50 years [20]. In MS patients, the thalamus, hippocampus, striatum, brainstem, and cerebellum are mostly affected [21], [22], [23]. Downregulation of the Nrf2/HO-1 transcription factor also triggers many neurophysiological alterations in amyotrophic lateral sclerosis (ALS) [24], Alzheimer's disease (AD) [25], Parkinson's disease (PD) [26], Huntington's disease (HD) [27], cerebral ischemic injury [28], intracerebral haemorrhage [29], and depression [30].  Furthermore, previous research concluded that Nrf2 and HO-1 downregulation exacerbate neuro complications, so we hypothesized that Nrf2/HO-1 might be a major factor in the pathogenesis of MS. On the other hand, Nrf2/HO-1 activators are beneficial in the prevention of various neurological disorders, including MS 

Absence of Nrft2

Several studies have indicated that Nrf2 downregulation is vital in the pathogenesis of MS [51]. The absence of Nrf2 has been related to a faster onset and even more severe clinical outcome characterized by increased glial activation, axonal degeneration, spinal cord injury, and an increase in inflammatory cells [8]. Researchers found no mechanistic differences between Nrf2 and HO-1, an antioxidant defense mechanism investigated in the brain and spinal cord. According to the human protein atlas, Nrf2/HO-1 expression is higher in the spinal cord than in the brain; however, some brain areas, such as the midbrain and cerebellum, have more increased Nrf2 and HO-1 expression than the spinal cord [52,53]. Downregulation of Nrf2 and HO-1 causes demyelination of motor neurons in the spinal cord's anterior horn, whereas activation has a protective effect [54]. Spinal cord injury in rats demonstrates the dysfunction of Nrf2/HO-1 leads to oxidative stress, which mediates apoptosis and inflammation in the spinal cord [55]. Aging is associated with Nrf2/HO-1 dysfunction, which leads to white matter degeneration, microgliosis, blood-brain barrier damage, and cognitive impairment. 

Nrf2/HO-1 leads to oxidative stress, which mediates apoptosis and inflammation in the spinal cord

Aging is associated with Nrf2/HO-1 dysfunction, which leads to white matter degeneration, microgliosis, blood-brain barrier damage, and cognitive impairment. 

Nrf2 expression in dopaminergic neurons was reduced in PD patients

The dysregulation of the Nrf2/HO-1 signaling pathway increases oxidative stress, which leads to the worsening of neurocomplications associated with oxidative stress-mediated ischemia-reperfusion in rats [62]. Nrf2 expression in dopaminergic neurons was reduced in PD patients [36]. Furthermore, loss of Nrf2 worsens MPTP-induced neurotoxicity in a PD mouse model by activating microglia and inducing neuroinflammation . Dopaminergic neuron degeneration and microglial activation were observed in Nrf2 knockout mice . Gpx and SOD1 anti-oxidant enzyme levels were lower in HD patients lacking Nrf2 . Once the Nrf2 signaling pathway is dysregulated, oxidative stress and mitochondrial dysfunction are frequently increased, linked to the progression of motor neuron disorders such as HD [67]. In ALS and dysregulation of the Nrf2/HO-1 signaling mechanism can result in oligodendrocyte destruction and demyelination of motor neurons in the motor cortex and spinal cord [68]. Preclinical studies in stroke conditions indicate that mice lacking Nrf2 have more inflammatory responses, infarcts, and neurological defects than mice expressing Nrf2.

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Downregulation of Nrf2/HO-1 anti-oxidant signaling in the progression of multiple sclerosis and related neurocomplications

Downregulation of the Nrf2/HO-1 signalling pathway results in a decrease in antioxidative enzymes, which leads to increased oxidative damage [11], neuroinflammation [12], immune dysregulation [14], oligodendrocyte loss [15], demyelination [17], mitochondrial dysfunction [13], apoptosis [16], and neurotransmitter imbalance [70]. All of these pathological markers play a significant role in the progression of 

Reduced synaptic activity

nvolvement of Nrf2/HO-1 signaling downregulation in the progression of multiple sclerosis

Downregulation of Nrf2 reduced the expression of the HO-1 gene which are involved in the regulation of various anti-oxidant enzyme and promotes the excessive ROS/RNS production that can activate glial cells (astrocytes and microglia) that release proinflammatory cytokines which induce neuroinflammation, neuronal apoptosis which leads to oligodendrocyte destruction, demyelination, and reduced neuronal synaptic plasticity. Downregulation of Nrf2 is also involved in the imbalance of neurotransmitter levels.

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Nrf2/HO-1 signaling downregulation in genetic dysfunction

Nrf2 is a transcription factor encoded by the NFE2L2 gene in humans. Downregulation of Nrf2/HO-1 negatively regulates its downstream genes, such as GSTP1, GSTM1, and HO-1. All of these are linked to the development of MS-like neurocomplications. In PD, patient NFE2L2 mutations have decreased anti-oxidant enzyme levels. NFE2L2 mutations inhibit ARE-driven gene transcription and reduce the expression of target genes such as GSTP1, GSTM1, NQO1, and HO-1

Genes

Mutation in GSTP1 and NQO1

MS has been associated with mutations in genes encoding anti-oxidant enzymes such as NQO1 and GSTP1 [78]. NQO1 is a Phase II detoxifying enzyme that catalyzes the removal of two electrons from exogenous and endogenous quinones, preventing them from participating in redox cycling and generating hydrogen peroxide (H2O2) [79]. The glutathione S-transferase (GST) supergene family encodes enzymatic activities needed for anti-oxidant protection mechanisms. GSTP1 mutations substantially increase oxidative stress, which is linked to inflammation and demyelination [80]. Baronica's study looks at the impact of the GSTP1 detoxification process on the clinical phenotype of MS patients [81]. Stavropoulou and colleagues successfully investigated the expression of NQO1 genetic variants in 231 MS patients and 380 controls. As a result, NQO1 gene expression decreased in MS patients. The NQO1 gene polymorphism suggests that the NQO1 genetic background may play a role in developing PPMS. These findings provided the first proof that NQO1 mutations contribute to MS prevalence. Downregulation of Nrf2/HO-1 activity causes genetic alterations in the GSTP1 and NQO1 genes, which leads to the development of PPMS 

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Nrft2

Activators

Multiple Sclerosis

Downregulation

Targeting Nrf2/HO-1 anti-oxidant signaling pathway in the progression of multiple sclerosis and influences on neurological dysfunctions

Nrft2

Downregulation

Multiple Sclerosis

Downregulation

Nrf2/HO-1 anti-oxidant signaling is essential for neuronal cell proliferation, survival, and neurogenesis.

  • •Involvement of Nrf2/HO-1 anti-oxidant signaling in the progression of multiple sclerosis.
  • •Dysregulation of Nrf2/HO-1 involved in various neurodegenerative diseases.
  • •Downregulation of Nrf2/HO-1 signaling pathway linked to the development of neuroinflammation, immune dysregulation, oligodendrocyte loss, demyelination.

Downregulated Caused Disease

Multiple Sclerosis

Multiple Sclerosis

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